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AGO3 protein (Chlamydomonas reinhardtii) - STRING interaction network
"AGO3" - Argonaute-like protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGO3Argonaute-like protein (1037 aa)    
Predicted Functional Partners:
DCL1
Dicer-like protein (1927 aa)
     
  0.985
DCL2
Dicer-like protein (5684 aa)
     
  0.953
EDP05779
Predicted protein (150 aa)
       
 
  0.890
EFG2
Elongation factor 2 (845 aa)
       
      0.744
RPB1
DNA-directed RNA polymerase II, largest subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1789 aa)
     
  0.739
EDO98646
Predicted protein (231 aa)
       
  0.716
XPO1
Exportin (1075 aa)
     
  0.662
SET3
Histone methyltransferase (957 aa)
     
 
  0.641
EDP01555
Predicted protein (662 aa)
     
 
    0.601
RPB2
DNA-directed RNA polymerase II, 135 kDa polypeptide; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1634 aa)
     
 
  0.598
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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