STRINGSTRING
EDO99237 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO99237" - Histone deacetylase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO99237Histone deacetylase (396 aa)    
Predicted Functional Partners:
EDP03175
Histone methyltransferase (1708 aa)
   
  0.926
SET4
Histone methyltransferase (2983 aa)
   
  0.915
EDO96250
Histone deacetylase (273 aa)
   
  0.910
EDO96788
SIN3 component of histone deacetylase complex (542 aa)
     
  0.885
EDP00599
Nucleosome remodeling factor (418 aa)
     
  0.884
EDP08347
Histone acetyltransferase (517 aa)
     
  0.857
EDO98539
Histone deacetylase (339 aa)
   
0.838
EDP02188
Histone deacetylase (419 aa)
   
0.816
EDP01149
Histone deacetylase (418 aa)
   
0.810
HTV1
Histone H3 variant (105 aa)
   
  0.809
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
Server load: low (3%) [HD]