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AMI2 protein (Chlamydomonas reinhardtii) - STRING interaction network
"AMI2" - Amidase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMI2Amidase (507 aa)    
Predicted Functional Partners:
EDP03820
Predicted protein (426 aa)
 
  0.973
EDO95650
Predicted protein (120 aa)
 
  0.973
DUR1
Urea carboxylase (1251 aa)
   
  0.915
NED1
NAD dependent epimerase/dehydratase family protein (369 aa)
         
  0.814
AMI1
Formamidase (455 aa)
   
   
  0.791
GTS2
Non-discriminatory gln-glu-trna synthetase (538 aa)
   
  0.770
EDO99104
Predicted protein (369 aa)
   
  0.763
GTS1
Gln-glu non-discriminatory tRNA synthetase (763 aa)
   
  0.752
ASPS1
aspartyl-tRNA synthetase (714 aa)
   
  0.703
EDP05600
DNA topoisomerase-like protein; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand (772 aa)
   
   
  0.681
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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