STRINGSTRING
EDO99289 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO99289" - Chlamyopsin-6 in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO99289Chlamyopsin-6 (1223 aa)    
Predicted Functional Partners:
EDP01312
Predicted protein (146 aa)
   
 
  0.964
EDP08395
Predicted protein (69 aa)
   
 
  0.963
HDPT1
Histidine-aspartic acid phosphotransferase 1 (151 aa)
       
 
  0.923
EDO98796
Predicted protein (705 aa)
     
  0.852
EDP06988
Predicted protein (235 aa)
   
0.816
EDP05135
SNF2 superfamily protein (1610 aa)
     
  0.804
S6K1
Ribosomal protein S6 kinase (319 aa)
     
  0.780
EDO98188
Predicted protein (75 aa)
     
  0.780
EDP05763
Predicted protein (206 aa)
     
  0.759
EDP03411
Predicted protein (252 aa)
     
  0.743
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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