STRINGSTRING
EDO99314 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO99314" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO99314Predicted protein (2560 aa)    
Predicted Functional Partners:
EDO98368
Predicted protein (2252 aa)
     
        0.479
CAV9
Voltage-gated Ca2+ channel, alpha subunit (1878 aa)
     
        0.479
RWP3
RWP-RK transcription factor (627 aa)
     
        0.475
AML1
RNA-binding protein (1003 aa)
     
        0.475
EDO95896
Predicted protein (1100 aa)
     
        0.475
EDP07147
Predicted protein (94 aa)
     
        0.470
EDP09741
Predicted protein (1535 aa)
     
        0.428
MFT2
MATE efflux family protein (363 aa)
     
        0.416
EDP02524
Predicted protein (343 aa)
     
        0.407
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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