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CYN57 protein (Chlamydomonas reinhardtii) - STRING interaction network
"CYN57" - Peptidyl-prolyl cis-trans isomerase, cyclophilin-type in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYN57Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (619 aa)    
Predicted Functional Partners:
EDP03322
Predicted protein (811 aa)
     
  0.987
EDP05779
Predicted protein (150 aa)
     
  0.972
EDP09509
Predicted protein (494 aa)
     
  0.929
PRP19
Spliceosome component, nuclear pre-mRNA splicing factor (503 aa)
     
  0.927
EDP09724
Predicted protein (830 aa)
     
  0.916
XAB2
Transcription-coupled DNA repair protein (886 aa)
     
    0.837
SMP6A
U6 small ribonucleoprotein F; Probable common Sm protein, is found in U1 and U2 snRNPs and may be part of the spliceosome (89 aa)
     
  0.834
EDP09592
Predicted protein (698 aa)
     
  0.830
LSM2
Sm-D1 protein (93 aa)
       
  0.828
TOP2
DNA topoisomerase II; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1167 aa)
     
  0.828
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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