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EDO99344 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO99344" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO99344Predicted protein (126 aa)    
Predicted Functional Partners:
TRM4
tRNA-(m5C) methyltransferase (392 aa)
     
        0.666
EDP07112
Predicted protein (116 aa)
     
        0.651
EDP07550
Predicted protein (281 aa)
     
        0.619
EDP07113
Predicted protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (720 aa)
     
        0.602
EDP03163
Predicted protein (514 aa)
     
        0.551
EDP06418
Predicted protein; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (634 aa)
     
        0.546
EDP00683
Predicted protein (516 aa)
     
        0.546
EDP06717
Predicted protein (201 aa)
     
        0.536
EDP03945
Predicted protein (93 aa)
     
        0.525
EDP07231
Predicted protein (440 aa)
     
        0.520
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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