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CHYB protein (Chlamydomonas reinhardtii) - STRING interaction network
"CHYB" - Beta-carotene hydroxylase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHYBBeta-carotene hydroxylase (297 aa)    
Predicted Functional Partners:
CYP97A5
Cytochrome P450, carotenoid hydroxylase (652 aa)
         
  0.952
ZEP1
Zeaxanthin epoxidase (763 aa)
     
 
  0.943
CYP97A6
Cytochrome P450, carotenoid hydroxylase (655 aa)
         
  0.901
LCYE
Lycopene epsilon cyclase (583 aa)
           
  0.835
CBK1
Beta-carotene ketolase (444 aa)
           
  0.807
EDP03604
Flavoprotein monooxygenase (486 aa)
           
  0.600
FAB2
Plastid acyl-ACP desaturase (401 aa)
   
     
  0.596
PDS1
Phytoene desaturase (564 aa)
           
  0.514
GGPS
Geranylgeranyl diphosphate synthase (345 aa)
     
   
  0.502
PFK1
Phosphofructokinase family protein (529 aa)
           
  0.479
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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