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SNE6 protein (Chlamydomonas reinhardtii) - STRING interaction network
"SNE6" - UDP-glucose 4-epimerase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNE6UDP-glucose 4-epimerase (349 aa)    
Predicted Functional Partners:
UGD2
UDP-glucose dehydrogenase (478 aa)
   
 
  0.986
UGD1
UDP-glucose dehydrogenase (477 aa)
   
 
  0.983
UGP1
UDP-glucose pyrophosphorylase (474 aa)
   
 
  0.971
SNE5
NAD-dependent epimerase/dehydratase (328 aa)
   
 
0.970
EDP03479
Predicted protein (494 aa)
   
 
  0.970
UAP2
UDP-N-acetylglucosamine-pyrophosphorylase (831 aa)
   
 
  0.941
SNE1
Sugar nucleotide epimerase (384 aa)
     
  0.933
EDP04318
Galactokinase-like protein (509 aa)
   
 
  0.932
GAL1
Galactose kinase (520 aa)
   
 
  0.932
SQD1
UDP-sulfoquinovose synthase (479 aa)
         
    0.900
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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