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EDO99394 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO99394" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO99394Predicted protein (268 aa)    
Predicted Functional Partners:
TRM1
N2,N2-dimethylguanosine tRNA methyltransferase (410 aa)
     
   
  0.814
EDP04787
Predicted protein; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (396 aa)
     
        0.795
EDP07550
Predicted protein (281 aa)
     
        0.780
EDP07168
Predicted protein (231 aa)
     
 
  0.774
TRM4
tRNA-(m5C) methyltransferase (392 aa)
   
 
  0.756
EDP01097
Predicted protein (181 aa)
     
        0.739
EDO98904
Ribosome biogenesis pescadillo-like protein; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (678 aa)
     
        0.739
EDP06493
Predicted protein (341 aa)
     
   
  0.734
EDP03165
Predicted protein (330 aa)
     
        0.734
EDP03014
Predicted protein (343 aa)
     
   
  0.725
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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