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EDO99399 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO99399" - Predicted protein in Chlamydomonas reinhardtii
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO99399Predicted protein (281 aa)    
Predicted Functional Partners:
EDP08234
Predicted protein (263 aa)
   
 
0.950
EDP07490
Predicted protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (109 aa)
     
      0.698
RPC19
RNA polymerase subunit (99 aa)
     
      0.698
RPB6
Subunit of DNA-directed RNA polymerase (87 aa)
     
 
  0.674
RPB10
DNA-directed RNA polymerases I/II/III subunit (79 aa)
     
 
  0.665
RPB9
DNA-directed RNA polymerase II, 14.5 kDa polypeptide; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (118 aa)
     
      0.654
RPB7A
DNA-directed RNA polymerase II, 19 kDa polypeptide (176 aa)
     
 
  0.645
RPB7B
DNA-directed RNA polymerase II, 19 kDa polypeptide (201 aa)
     
      0.640
EDP02864
DNA-directed RNA polymerase III, subunit 2; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1161 aa)
     
 
  0.639
RPB3
DNA-directed RNA polymerase II, 36 kDa polypeptide (275 aa)
     
      0.638
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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