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EDO99427 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO99427" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO99427Predicted protein (960 aa)    
Predicted Functional Partners:
EDP02864
DNA-directed RNA polymerase III, subunit 2; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1161 aa)
     
   
  0.692
EDP00627
Predicted protein (513 aa)
   
   
  0.667
EDO99233
Predicted protein (330 aa)
   
   
  0.590
EDP00561
Predicted protein (440 aa)
   
   
  0.576
EDP09106
Predicted protein (377 aa)
   
   
  0.561
EDP01779
Predicted protein (1143 aa)
     
        0.545
OEP80
Chloroplast outer envelope protein (727 aa)
   
   
  0.537
EDP01156
Predicted protein (535 aa)
     
        0.536
EDP03190
Predicted protein (154 aa)
         
  0.532
SECA1
Chloroplast-associated SecA protein (1029 aa)
         
  0.532
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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