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EDO99470 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO99470" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO99470Predicted protein (520 aa)    
Predicted Functional Partners:
EDO99471
Predicted protein (102 aa)
     
        0.720
RPB1
DNA-directed RNA polymerase II, largest subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1789 aa)
     
        0.596
CDKH1
Cyclin dependent kinase (439 aa)
     
        0.505
RPB9
DNA-directed RNA polymerase II, 14.5 kDa polypeptide; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (118 aa)
     
        0.502
TF2H2
Transcription factor TFIIH, 44 kDa subunit (413 aa)
     
        0.486
EDO99791
VID72-domain protein (600 aa)
     
        0.483
EDP03378
Predicted protein (2505 aa)
     
        0.480
ELG25
Exostosin-like glycosyltransferase (879 aa)
     
        0.428
EDP06899
Predicted protein (93 aa)
     
        0.411
APG5
Autophagy protein; Required for autophagy (234 aa)
     
        0.407
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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