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EDO99505 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO99505" - Predicted protein in Chlamydomonas reinhardtii
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO99505Predicted protein (1212 aa)    
Predicted Functional Partners:
POLA1
DNA polymerase alpha subunit one (1114 aa)
     
 
  0.989
EDP05600
DNA topoisomerase-like protein; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand (772 aa)
     
  0.974
RPB1
DNA-directed RNA polymerase II, largest subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1789 aa)
     
    0.973
SPLH2
DEAH-box nuclear pre-mRNA splicing factor (371 aa)
     
  0.973
97782p
Predicted protein (204 aa)
     
 
  0.964
SPL3
SF3A3 splicing factor 3a, subunit 3 (508 aa)
     
  0.957
CDC45
Cell division cycle protein 45 (641 aa)
     
 
  0.955
EDP03322
Predicted protein (811 aa)
     
  0.954
SMP1
Small nuclear ribonucleoprotein (127 aa)
     
  0.954
PRP19
Spliceosome component, nuclear pre-mRNA splicing factor (503 aa)
     
  0.952
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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