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EDO99516 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO99516" - Carotenoid isomerase in Chlamydomonas reinhardtii
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO99516Carotenoid isomerase (568 aa)    
Predicted Functional Partners:
PSY
Phytoene synthase (382 aa)
 
 
  0.929
PDS1
Phytoene desaturase (564 aa)
 
 
  0.875
FPPS
Farnesyl diphosphate synthase (360 aa)
         
  0.836
ZDS1
Zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7’ (582 aa)
 
 
  0.829
ZEP1
Zeaxanthin epoxidase (763 aa)
         
  0.808
DXR1
1-deoxy-D-xylulose 5-phosphate reductoisomerase (415 aa)
     
   
  0.788
CHLD
Magnesium chelatase subunit D; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX (767 aa)
   
   
  0.743
CHLG
Chlorophyll synthetase (383 aa)
 
   
  0.743
EDP06129
Farnesyl-diphosphate farnesyltransferase (378 aa)
   
 
  0.730
EDP08879
Predicted protein (501 aa)
 
 
  0.718
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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