STRINGSTRING
CPLD16 protein (Chlamydomonas reinhardtii) - STRING interaction network
"CPLD16" - RNA methyl transferase-related protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPLD16RNA methyl transferase-related protein (423 aa)    
Predicted Functional Partners:
EDP00627
Predicted protein (513 aa)
     
        0.688
TRM2C
tRNA (uracil-5-)-methyltransferase (364 aa)
   
   
  0.681
RCL1
RNA terminal 3’ phosphate cyclase (370 aa)
     
        0.670
EDP05821
Predicted protein (924 aa)
     
        0.667
EDP08920
Predicted protein (523 aa)
   
        0.666
EDP05459
Predicted protein (202 aa)
     
   
  0.666
EDP02427
Predicted protein (825 aa)
     
        0.665
EDP05784
Predicted protein (610 aa)
     
        0.664
CGL65
Predicted protein (253 aa)
     
        0.664
EDP00325
Predicted protein (163 aa)
     
        0.664
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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