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AST5 protein (Chlamydomonas reinhardtii) - STRING interaction network
"AST5" - Aspartate aminotransferase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AST5Aspartate aminotransferase (379 aa)    
Predicted Functional Partners:
AHD1
Bifunctional aspartate kinase/homoserine dehydrogenase (917 aa)
   
  0.934
GSN1
Glutamate synthase, NADH-dependent (2201 aa)
   
  0.917
GSF1
Ferredoxin-dependent glutamate synthase (1552 aa)
   
  0.906
HSD1
Homoserine dehydrogenase (416 aa)
   
  0.857
SHKD1
Dehydroquinate dehydratase (554 aa)
   
   
  0.782
GYD1
Glycolate dehydrogenase (1095 aa)
   
 
  0.768
ADC1
Aminodeoxychorismate synthase (724 aa)
     
 
  0.754
GCSP
Glycine cleavage system, P protein (1039 aa)
   
 
  0.739
AGD1
Arogenate/prephenate dehydrogenase (403 aa)
       
  0.683
EDO99435
Predicted protein (295 aa)
     
 
  0.659
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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