STRINGSTRING
SRP36 protein (Chlamydomonas reinhardtii) - STRING interaction network
"SRP36" - SR protein factor in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRP36SR protein factor (320 aa)    
Predicted Functional Partners:
SMP12
U1 small nuclear ribonucleoprotein (394 aa)
     
  0.969
RSZ22
SR protein factor (200 aa)
     
0.960
EDP07744
Predicted protein (116 aa)
       
 
  0.941
SCL26
SR protein factor (224 aa)
     
0.935
EDP00988
AIR synthase-related protein (1403 aa)
   
      0.920
EDP08691
Predicted protein (233 aa)
     
  0.916
SCL27
SR protein factor (286 aa)
     
 
  0.897
SPL8
U2 snRNP auxiliary factor, large subunit (306 aa)
     
  0.893
EDP02964
Predicted protein (110 aa)
     
  0.888
EDP01981
Predicted protein (110 aa)
     
  0.888
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
Server load: low (5%) [HD]