STRINGSTRING
SSA6 protein (Chlamydomonas reinhardtii) - STRING interaction network
"SSA6" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSA6Predicted protein (761 aa)    
Predicted Functional Partners:
EDO99670
Predicted protein (1225 aa)
     
        0.603
EDP07696
Predicted protein (633 aa)
     
        0.600
EDP04256
Predicted protein (141 aa)
     
        0.599
EDO98656
Predicted protein (1580 aa)
     
        0.542
PUF2
Puf protein (314 aa)
     
        0.525
EDP05440
Predicted protein (1156 aa)
     
        0.524
FAP261
Flagellar associated protein (3547 aa)
     
        0.524
EDP06108
Ankyrin (909 aa)
     
   
  0.524
EDP09463
Predicted protein (834 aa)
     
        0.520
EDP06631
Predicted protein (912 aa)
     
        0.520
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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