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VAMP75 protein (Chlamydomonas reinhardtii) - STRING interaction network
"VAMP75" - R-SNARE protein, VAMP71-family in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VAMP75R-SNARE protein, VAMP71-family (218 aa)    
Predicted Functional Partners:
VTI1
Qb-SNARE protein, VTI1-family (223 aa)
     
  0.944
BET1
Qc-SNARE protein, Bet1/mBET1 family (110 aa)
     
  0.942
SYP3
Qa-SNARE protein, Sed5/Syntaxin5-family (339 aa)
     
  0.939
SYP1
Qa-SNARE Sso1/Syntaxin1, PM-type (311 aa)
     
  0.932
SYP4
Qa-SNARE protein, Tlg2/Syntaxin16-family (309 aa)
     
  0.929
SNAPA1
alpha-SNAP (303 aa)
     
  0.894
GOS1
Qb-SNARE protein, Gos1/GS28-family (258 aa)
     
  0.884
SYP5
Qc-SNARE protein, Syn8/Syntaxin8-family (243 aa)
     
  0.880
SYP6
Qc-SNARE protein, Tlg1/Syntaxin 6-family (225 aa)
     
  0.880
EDP07906
N-ethylmaleimide sensitive fusion protein (719 aa)
     
  0.876
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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