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EDO99606 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO99606" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO99606Predicted protein (420 aa)    
Predicted Functional Partners:
EDP04982
Predicted protein (310 aa)
     
        0.687
EDP07550
Predicted protein (281 aa)
     
        0.674
EDP05158
Predicted protein (407 aa)
   
        0.623
RRP46
Exosome complex exonuclease (242 aa)
     
 
  0.610
EDP03723
Predicted protein (258 aa)
     
        0.602
RRP40
3’-5’ exonuclease component of the exosome (231 aa)
     
      0.599
EDO98790
Predicted protein (147 aa)
     
        0.593
PUS8
Pseudouridine synthase (241 aa)
   
   
  0.588
EDO96340
Predicted protein (345 aa)
   
   
  0.587
UROD3
Uroporphyrinogen decarboxylase (398 aa)
     
 
  0.571
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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