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RABC2 protein (Chlamydomonas reinhardtii) - STRING interaction network
"RABC2" - Small rab-related GTPase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RABC2Small rab-related GTPase (210 aa)    
Predicted Functional Partners:
VPS37
Subunit of the ESCRT-I complex (342 aa)
     
      0.670
RABH1
Small rab-related GTPase (211 aa)
   
 
0.626
PF9
Flagellar inner arm dynein 1 heavy chain alpha (4625 aa)
         
  0.570
ODA2
Flagellar outer dynein arm heavy chain gamma (2974 aa)
         
  0.569
VPS28
Subunit of the ESCRT-I complex (225 aa)
       
      0.554
DHC11
Dynein heavy chain 11 (3308 aa)
     
 
    0.554
DHC3
Dynein heavy chain 3 (3751 aa)
     
 
    0.548
DHC9
Dynein heavy chain 9 (2612 aa)
     
 
    0.548
MRS5
Magnesium and cobalt transport protein (671 aa)
     
        0.516
SEC6
Component of the exocyst complex (763 aa)
     
        0.480
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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