STRINGSTRING
EDO99622 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO99622" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO99622Predicted protein (304 aa)    
Predicted Functional Partners:
EDP04948
Predicted protein (559 aa)
     
        0.508
EDP02420
Predicted protein (323 aa)
     
        0.504
MFT2
MATE efflux family protein (363 aa)
     
        0.500
EDO97616
Predicted protein (59 aa)
     
        0.478
EDP01800
Predicted protein (1064 aa)
     
        0.470
AML1
RNA-binding protein (1003 aa)
     
        0.466
MSCL1
Predicted protein (592 aa)
     
        0.428
EDP00577
Predicted protein (743 aa)
     
        0.428
EDP09821
Predicted protein (102 aa)
     
        0.418
EDP02568
Predicted protein (320 aa)
     
        0.414
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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