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EDO99685 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO99685" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO99685Predicted protein (1025 aa)    
Predicted Functional Partners:
EDP00636
Predicted protein (969 aa)
     
 
  0.773
RPL40
Ubiquitin-60S ribosomal protein L40; Ubiquitin- exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked- Lys-48-linked is involve [...] (128 aa)
       
 
  0.718
EDP07531
Predicted protein (349 aa)
     
 
  0.709
RPS27a
Ribosomal protein S27a (182 aa)
     
 
  0.702
PRPL18
Plastid ribosomal protein L18 (145 aa)
     
 
  0.624
EDP06657
Ubiquitinyl hydrolase 1; Ubiquitin carboxyl-terminal hydrolase (629 aa)
     
 
  0.614
GUA1
GMP synthetase (535 aa)
     
 
  0.577
XPO1
Exportin (1075 aa)
     
        0.572
EDP08400
Predicted protein; Belongs to the peptidase C19 family (350 aa)
     
   
  0.530
UBA1
Ubiquitin-activating enzyme E1 ; Belongs to the ubiquitin-activating E1 family (1061 aa)
     
 
  0.529
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90
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