STRINGSTRING
EDO99692 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO99692" - Alkane hydroxylase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO99692Alkane hydroxylase (472 aa)    
Predicted Functional Partners:
EDP09855
Fatty acid desaturase; Fatty acid desaturase that introduces a cis double bond at the 4-position in 16-carbon polyunsaturated fatty acids that contain a Delta(7) double bond, resulting in the production of 16 carbon fatty acid (7Z,10Z,13Z)-hexadeca-7,10,13-trienoate (1675 aa)
           
  0.806
RBD3
Rubredoxin-like protein (142 aa)
           
  0.801
MTT1
Mitochondrial transcription termination factor (234 aa)
           
  0.605
EDP05135
SNF2 superfamily protein (1610 aa)
     
        0.561
EDP07067
U2 snRNA-like protein (87 aa)
     
        0.509
EDO98261
Predicted protein (139 aa)
     
        0.504
EDP01816
NAD(P)-dependent steroid dehydrogenase (437 aa)
     
        0.501
CPL2
Transcription factor-like protein (521 aa)
     
        0.475
EDO98522
Predicted protein (387 aa)
     
        0.475
BTA1
diacylglyceryl-N,N,N-trimethylhomoserine synthesis protein (666 aa)
           
  0.467
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
Server load: low (7%) [HD]