STRINGSTRING
MCCA protein (Chlamydomonas reinhardtii) - STRING interaction network
"MCCA" - methylcrotonoyl-CoA carboxylase alpha subunit in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCCAmethylcrotonoyl-CoA carboxylase alpha subunit (764 aa)    
Predicted Functional Partners:
EDO96794
Predicted protein (519 aa)
 
  0.996
DUR1
Urea carboxylase (1251 aa)
 
 
0.904
BPL1
Holocarboxylase synthetase (229 aa)
       
  0.815
EDP05055
Predicted protein (429 aa)
   
 
  0.742
GHL1
Glycosyl hydrolase (664 aa)
           
  0.738
EDO98796
Predicted protein (705 aa)
   
  0.695
EDO98754
Predicted protein (324 aa)
   
 
  0.577
EDO95645
Predicted protein (67 aa)
   
 
  0.577
EDP05590
Predicted protein (501 aa)
       
  0.554
EDP04952
Predicted protein (238 aa)
       
  0.554
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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