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CCB1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"CCB1" - CPLD51 protein required for cyt b6 assembly in Chlamydomonas reinhardtii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCB1CPLD51 protein required for cyt b6 assembly (269 aa)    
Predicted Functional Partners:
CCB2
Protein required for cyt b6 assembly (310 aa)
     
   
  0.884
CCB4
CGLD23 protein required for cyt b6 assembly (306 aa)
     
   
  0.872
CCB3
CPLD43 protein required for cyt b6 assembly (193 aa)
     
   
  0.859
PPR3
Protein with PPR repeats (160 aa)
     
   
  0.711
EDO96193
Predicted protein (61 aa)
     
        0.666
EDO96194
Predicted protein (156 aa)
     
        0.634
TEF10a
Predicted protein (223 aa)
     
        0.579
EFT1a
Plastid-specific ribosomal protein 7; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome (1013 aa)
     
        0.565
HST1
Homogentisate solanesyltransferase; Involved in the synthesis of plastoquinone-9. Can use both homogentisic acid and 2,5-dihydroxyphenylacetic acid gamma- lactone as prenyl acceptors, and solanesyl diphosphate > farnesyl diphosphate > geranylgeranyl diphosphate >> phytyl diphosphate as prenyl donnors. Do not catalyze the decardoxylation of homogentisate uncoupled from prenylation (300 aa)
     
        0.545
PRFA1
Peptide chain release factor (383 aa)
     
        0.544
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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