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EDO99796 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO99796" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO99796Predicted protein; GTPase that plays an essential role in the late steps of ribosome biogenesis (446 aa)    
Predicted Functional Partners:
EDP03270
RimM-like protein (181 aa)
   
   
  0.800
PRPL24
Plastid ribosomal protein L24 (170 aa)
     
 
  0.795
PRPL6
Plastid ribosomal protein L6 (207 aa)
     
 
  0.782
EDP05885
Predicted protein (150 aa)
     
 
  0.781
PRPL1
Plastid ribosomal protein L1 (297 aa)
     
 
  0.781
RPL10a
Ribosomal protein L10a, component of cytosolic 80S ribosome and 60S large subunit (214 aa)
     
 
  0.780
MRPL1
Mitochondrial ribosomal protein L1 (169 aa)
     
 
  0.780
RPL26
Ribosomal protein L26 (145 aa)
     
 
  0.780
RPL9
Ribosomal protein L9 (191 aa)
     
 
  0.767
EDO95958
Predicted protein (50 aa)
     
 
  0.767
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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