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EDO99832 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO99832" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO99832Predicted protein (592 aa)    
Predicted Functional Partners:
VPS35
Subunit of retromer complex (739 aa)
     
 
  0.914
EDP01793
Predicted protein (256 aa)
     
 
  0.898
VPS26
Subunit of retromer complex (320 aa)
     
 
  0.815
VPS29
Subunit of retromer complex (188 aa)
     
 
  0.594
EDP00845
Predicted protein (428 aa)
     
   
  0.556
HSLU1
ATP-dependent subunit of the HslUV protease (559 aa)
     
        0.507
VPS34
VPS34-like PI-3-kinase (1098 aa)
     
 
  0.496
EDO99902
Predicted protein (440 aa)
     
        0.494
VSR1
Vacuolar sorting receptor (700 aa)
     
        0.475
VPS5C
Subunit of retromer complex (747 aa)
     
 
  0.467
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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