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EDO99837 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO99837" - RNA binding protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO99837RNA binding protein (316 aa)    
Predicted Functional Partners:
EDP01159
Predicted protein (170 aa)
     
  0.978
EDP00640
Predicted protein (169 aa)
     
  0.978
EDP09275
Predicted protein (73 aa)
     
  0.969
PRP19
Spliceosome component, nuclear pre-mRNA splicing factor (503 aa)
     
  0.947
XAB2
Transcription-coupled DNA repair protein (886 aa)
     
  0.939
EDP08691
Predicted protein (233 aa)
     
  0.931
EDP09509
Predicted protein (494 aa)
     
  0.926
PRP8
Splicing factor, component of the U5 snRNP and of the spliceosome (2346 aa)
     
  0.925
SMP12
U1 small nuclear ribonucleoprotein (394 aa)
     
  0.925
PRP17
Nuclear pre-mRNA splicing factor, component of the spliceosome (313 aa)
     
  0.924
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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