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EDO99875 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO99875" - Tryptophanyl-trna synthetase in Chlamydomonas reinhardtii
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO99875Tryptophanyl-trna synthetase (421 aa)    
Predicted Functional Partners:
EDP00155
Lysyl-trna synthetase, LysRS (591 aa)
   
   
  0.896
SYK1
tRNA synthetase, class II (551 aa)
   
   
  0.891
EDP06649
Predicted protein (353 aa)
   
   
  0.864
EDO98937
Predicted protein (492 aa)
   
   
  0.838
EDP00735
Predicted protein (403 aa)
         
  0.807
EDP05538
Predicted protein (526 aa)
   
   
  0.786
SERRS1
Seryl tRNA synthetase (120 aa)
   
 
  0.767
CLPR4
Inactive subunit of chloroplast ClpP complex (276 aa)
     
 
  0.767
CLPR3
Inactive subunit of chloroplast ClpP complex (415 aa)
     
 
  0.759
CLPR6
Inactive subunit of chloroplast ClpP complex (283 aa)
     
 
  0.756
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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