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PSRP-1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"PSRP-1" - Plastid-specific ribosomal protein 1 in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSRP-1Plastid-specific ribosomal protein 1 (286 aa)    
Predicted Functional Partners:
EDP07478
Myb family transcription factor (763 aa)
           
  0.801
PRPS5
Plastid ribosomal protein S5 (673 aa)
     
 
  0.728
PSRP-6
Plastid-specific ribosomal protein 6 (66 aa)
           
  0.711
PSRP-4
Plastid-specific ribosomal protein 4 (136 aa)
           
  0.711
EDP09872
Predicted protein; Removes the formyl group from the N-terminal Met of newly synthesized proteins (250 aa)
           
  0.661
PSRP-3
Plastid-specific ribosomal protein 3 (298 aa)
           
  0.645
PRPS21
Plastid ribosomal protein S21 (184 aa)
           
  0.631
PDF1B
Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins (248 aa)
           
  0.630
EDP04595
Predicted protein (601 aa)
         
  0.521
EDP04219
Predicted protein (555 aa)
         
  0.521
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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