STRINGSTRING
EDO99897 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO99897" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO99897Predicted protein (182 aa)    
Predicted Functional Partners:
EDO99896
Predicted protein (1742 aa)
     
        0.516
EDP07606
Predicted protein (141 aa)
     
        0.476
EDP00707
Predicted protein (300 aa)
     
        0.475
HUS1
DNA damage checkpoint protein (277 aa)
     
        0.475
EDP07607
Predicted protein (253 aa)
     
        0.416
EDP07659
Predicted protein (417 aa)
     
        0.412
RWP7
RWP-RK transcription factor (988 aa)
     
        0.400
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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