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PHOD protein (Chlamydomonas reinhardtii) - STRING interaction network
"PHOD" - Alkaline phosphatase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHODAlkaline phosphatase (656 aa)    
Predicted Functional Partners:
EDP07742
Predicted protein; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin (112 aa)
         
    0.900
EDP07107
Predicted protein (339 aa)
       
    0.801
EDO99698
Predicted protein (395 aa)
     
        0.672
EDO96290
Predicted protein (97 aa)
     
        0.671
EDP03001
Predicted protein (860 aa)
     
        0.669
EDO96151
Predicted protein (71 aa)
     
        0.669
DMC1
Rad51-like protein (343 aa)
     
   
  0.668
EDO97816
Predicted protein (224 aa)
     
        0.664
EDO98043
Predicted protein (125 aa)
     
        0.659
EDO96283
Predicted protein (690 aa)
     
        0.656
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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