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DAE1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"DAE1" - Diaminopimelate epimerase in Chlamydomonas reinhardtii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DAE1Diaminopimelate epimerase (318 aa)    
Predicted Functional Partners:
DPD1
Diaminopimelate decarboxylase (473 aa)
   
 
  0.992
DPA1
LL-diaminopimelate aminotransferase (441 aa)
 
 
  0.989
CMPL1
Carbamoyl phosphate synthase, large subunit (1075 aa)
       
  0.899
DPS1
Dihydrodipicolinate synthase (345 aa)
 
   
  0.875
DPR1
Dihydrodipicolinate reductase (315 aa)
           
  0.873
AHD1
Bifunctional aspartate kinase/homoserine dehydrogenase (917 aa)
       
  0.787
PRT1
Anthranilate phosphoribosyltransferase (390 aa)
           
  0.764
SHKD1
Dehydroquinate dehydratase (554 aa)
         
  0.740
SHKH1
Chorismate synthase (422 aa)
     
   
  0.733
GSN1
Glutamate synthase, NADH-dependent (2201 aa)
         
  0.714
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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