STRINGSTRING
EDO99952 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO99952" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO99952Predicted protein (1506 aa)    
Predicted Functional Partners:
EDP09574
Predicted protein (633 aa)
     
        0.588
EDP00404
Predicted protein (953 aa)
     
        0.587
EDP05058
Predicted protein (1235 aa)
     
        0.576
EDP03357
Predicted protein (329 aa)
     
        0.525
EDP07114
Predicted protein (273 aa)
     
        0.521
EDP04516
SWI/SNF chromatin remodeling complex component (845 aa)
     
        0.513
MLH1
Mismatch repair protein (1007 aa)
     
        0.508
EDP00491
Hypothetical protein (516 aa)
     
        0.508
EDO96940
Predicted protein (433 aa)
     
        0.508
EDO98953
DNA binding protein (661 aa)
     
        0.501
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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