STRINGSTRING
RCL1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"RCL1" - RNA terminal 3' phosphate cyclase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCL1RNA terminal 3’ phosphate cyclase (370 aa)    
Predicted Functional Partners:
EDO98320
Predicted protein (641 aa)
     
    0.993
EDP07957
Predicted protein (1139 aa)
     
  0.989
EDP03163
Predicted protein (514 aa)
     
 
  0.983
UTP1
Nucleolar protein, component of the U3 processome (996 aa)
     
  0.983
EDP05821
Predicted protein (924 aa)
     
 
  0.976
EDP07846
Predicted protein (286 aa)
     
 
  0.972
EDO97607
Predicted protein (193 aa)
     
  0.972
NOP14
Nucleolar protein (1137 aa)
     
  0.971
EDP05784
Predicted protein (610 aa)
     
  0.971
RNP3
Small nucleolar ribonucleoprotein U3 component (182 aa)
     
  0.965
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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