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EDO99982 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO99982" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO99982Predicted protein (3730 aa)    
Predicted Functional Partners:
RFC1
DNA replication factor C complex subunit 1 (1182 aa)
   
  0.786
EDP05831
Predicted protein (156 aa)
       
  0.749
UPF2
UPF2 protein (301 aa)
     
  0.716
EDP00439
Predicted protein (225 aa)
     
  0.701
EDO99548
Predicted protein (261 aa)
     
  0.682
EDP09795
Global transcription factor (1188 aa)
     
 
  0.678
RPA70B
Replication protein A, 70 kDa DNA-binding subunit (647 aa)
       
  0.668
RPA70A
Replication protein A, 70 kDa DNA-binding subunit (451 aa)
       
  0.668
EDO99505
Predicted protein (1212 aa)
     
 
  0.636
UPF3
UPF3 protein (371 aa)
     
  0.629
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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