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EDP00002 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP00002" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP00002Predicted protein (277 aa)    
Predicted Functional Partners:
EDP05135
SNF2 superfamily protein (1610 aa)
   
  0.863
EDO99164
Predicted protein (151 aa)
   
  0.801
FAP155
Flagellar associated protein (390 aa)
     
  0.798
EDP05764
Predicted protein (377 aa)
   
  0.794
EDP09377
Predicted protein (336 aa)
   
  0.782
EDP07849
Predicted protein (403 aa)
   
  0.780
EDP09892
Predicted protein (404 aa)
   
  0.777
EDO96379
Predicted protein (354 aa)
   
  0.774
EDO97024
Predicted protein (325 aa)
   
  0.773
EDP00893
Protein phosphatase 2C (361 aa)
   
  0.773
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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