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SPC18 protein (Chlamydomonas reinhardtii) - STRING interaction network
"SPC18" - Signal peptidase, catalytic subunit in Chlamydomonas reinhardtii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPC18Signal peptidase, catalytic subunit (203 aa)    
Predicted Functional Partners:
SPC22
Signal peptidase, 22 kDa subunit (168 aa)
     
  0.950
SEC61B
SEC61-beta subunit of ER-translocon (89 aa)
     
 
  0.906
CTP1
Heavy metal transporting ATPase (1097 aa)
   
   
  0.815
CTP2
Heavy metal transporting ATPase (1086 aa)
   
   
  0.747
EDP07241
Cmp24/gp25L/p24 family protein (212 aa)
     
      0.735
UBC1
Ubiquitin activating enzyme E1 (411 aa)
 
        0.666
PYR5
Uridine 5’-monophosphate synthase (474 aa)
   
   
  0.659
SPC25
Signal peptidase, 25 kDa subunit (198 aa)
     
    0.595
SEC61A
SEC61-alpha subunit of ER-translocon (476 aa)
   
 
  0.590
GSN1
Glutamate synthase, NADH-dependent (2201 aa)
   
   
  0.586
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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