STRINGSTRING
EDP00038 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP00038" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP00038Predicted protein (860 aa)    
Predicted Functional Partners:
EDO99983
Predicted protein (471 aa)
     
     
0.692
EDP01479
Predicted protein (1973 aa)
     
        0.661
EDO97799
Predicted protein (778 aa)
     
        0.657
UBC8
Ubiquitin-protein ligase (1258 aa)
     
        0.614
EDO99966
Predicted protein (643 aa)
     
        0.614
EDO96817
Predicted protein (311 aa)
     
        0.612
EDO98443
Predicted protein (1224 aa)
     
        0.590
EDP02019
Predicted protein (1084 aa)
     
        0.579
EDP01646
Predicted protein (1093 aa)
     
        0.565
EDP00435
Predicted protein (817 aa)
     
        0.525
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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