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EDP00042 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP00042" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP00042Predicted protein (801 aa)    
Predicted Functional Partners:
EDP04351
Predicted protein (1188 aa)
     
        0.682
EDP04144
Predicted protein (1362 aa)
     
        0.666
EDP06256
Predicted protein (1330 aa)
     
        0.657
POLZ1
DNA polymerase zeta (729 aa)
     
        0.657
EDP00695
Predicted protein (971 aa)
     
        0.653
LSP1
Signal transducer for phototaxis (716 aa)
     
        0.650
EDO96465
Predicted protein (294 aa)
     
        0.596
VPS39
Subunit of VPS-C complex (812 aa)
     
        0.584
EDO96828
Predicted protein (1480 aa)
     
        0.584
EDO98605
Predicted protein (502 aa)
     
        0.524
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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