STRINGSTRING
EDP00046 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP00046" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP00046Predicted protein (228 aa)    
Predicted Functional Partners:
EDP02089
Predicted protein (1623 aa)
     
        0.658
EDO97862
Predicted protein (148 aa)
     
        0.651
EDP03012
Predicted protein (1793 aa)
     
        0.650
EDP07245
Predicted protein (772 aa)
     
        0.598
EDO96080
Predicted protein (1418 aa)
     
        0.559
EDP01944
Predicted protein (912 aa)
     
        0.496
EDP06146
Predicted protein (436 aa)
     
        0.478
EDP06207
Predicted protein (418 aa)
     
        0.477
EDO96536
Predicted protein (423 aa)
     
        0.477
EDO96537
Predicted protein (238 aa)
     
        0.476
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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