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EDP00047 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP00047" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP00047Predicted protein (379 aa)    
Predicted Functional Partners:
EDP04331
Histone acetyltransferase, type b catalytic subunit (444 aa)
     
        0.665
EDP08677
Predicted protein (1660 aa)
     
        0.649
EDP07456
Predicted protein (308 aa)
     
        0.615
EDP03613
Predicted protein (351 aa)
     
        0.576
EDP03175
Histone methyltransferase (1708 aa)
     
        0.568
EDP04698
High mobility group protein (200 aa)
     
        0.555
GTR14
Glycosyl transferase (378 aa)
     
        0.529
EDP02421
Predicted protein (1653 aa)
     
        0.524
EDO99294
Predicted protein (479 aa)
     
        0.523
EDP00173
chromodomain-helicase-DNA-binding protein (2000 aa)
     
        0.521
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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