STRINGSTRING
EDP00059 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP00059" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP00059Predicted protein (156 aa)    
Predicted Functional Partners:
EDP08108
Predicted protein (209 aa)
     
        0.660
EDP03028
Predicted protein (257 aa)
     
        0.649
EDP10003
Reverse transcriptase, gag-pol polyprotein (462 aa)
     
        0.648
EDP05392
Predicted protein (163 aa)
     
        0.648
EDP03162
Predicted protein (58 aa)
     
        0.526
EDO96290
Predicted protein (97 aa)
     
        0.512
DMC1
Rad51-like protein (343 aa)
     
        0.511
EDP09246
Predicted protein (107 aa)
     
        0.503
EDP07136
Predicted protein (110 aa)
     
        0.499
EDO97106
Predicted protein (169 aa)
     
        0.475
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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