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BPL1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"BPL1" - Holocarboxylase synthetase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPL1Holocarboxylase synthetase (229 aa)    
Predicted Functional Partners:
EDP05478
Predicted protein (503 aa)
 
 
 
    0.949
EDP08299
Predicted protein (165 aa)
       
  0.942
BCC1
Acetyl-coa biotin carboxyl carrier (228 aa)
   
  0.924
DUR1
Urea carboxylase (1251 aa)
   
  0.900
EDO96794
Predicted protein (519 aa)
   
  0.852
PYC1
Pyruvate carboxylase (1165 aa)
       
  0.815
MCCA
methylcrotonoyl-CoA carboxylase alpha subunit (764 aa)
       
  0.815
EDO97598
Predicted protein (297 aa)
   
  0.754
EDP01282
acyl-CoA dehydrogenase (785 aa)
     
   
  0.752
EDP09078
Predicted protein (440 aa)
   
  0.748
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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