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EDP00074 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP00074" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP00074Predicted protein (125 aa)    
Predicted Functional Partners:
CHLH1
Magnesium chelatase subunit H (1399 aa)
   
   
  0.532
CHLH2
Magnesium chelatase subunit H (1253 aa)
   
   
  0.532
POA6
20S proteasome alpha subunit F; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH (278 aa)
     
        0.475
MAP1A
Methionine aminopeptidase (383 aa)
     
 
  0.435
MAP1D
Methionine aminopeptidase (337 aa)
     
 
  0.435
MAP2
Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val) (510 aa)
     
 
  0.435
EDO98981
Predicted protein (387 aa)
     
 
  0.435
EDP06649
Predicted protein (353 aa)
   
 
  0.423
TIG1
Chloroplast trigger factor (548 aa)
     
      0.408
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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