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EDP00087 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP00087" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP00087Predicted protein (297 aa)    
Predicted Functional Partners:
PCR1
Pyrroline-5-carboxylate reductase (347 aa)
     
 
    0.900
EDP09384
Proline oxidase (562 aa)
         
    0.900
EDP02704
Predicted protein (321 aa)
         
    0.900
EDO99550
Proline oxidase (527 aa)
         
    0.900
EIF4G
Eukaryotic initiation factor (797 aa)
           
  0.779
EDP08434
poly(A) binding protein (136 aa)
           
  0.631
CPL11
Translation factor (278 aa)
           
  0.478
RB60
Protein disulfide isomerase 1 (532 aa)
     
  0.448
EDO98104
Predicted protein (370 aa)
     
  0.448
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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