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EDP00098 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP00098" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP00098Predicted protein (129 aa)    
Predicted Functional Partners:
EDO98006
Nuclear pre-mRNA splicing factor, component of splicing factor 3b (1085 aa)
     
  0.997
EDP03818
Predicted protein (95 aa)
     
  0.996
EDO97595
Nuclear pre-mRNA splicing factor, component of splicing factor 3b (1078 aa)
       
  0.995
PRP19
Spliceosome component, nuclear pre-mRNA splicing factor (503 aa)
     
  0.984
PRP6
Splicing factor, component of the U4/U6-U5 snRNP complex (947 aa)
     
    0.981
EDO97886
Predicted protein (110 aa)
     
    0.966
EDO96746
Nuclear pre-mRNA splicing factor, component of splicing factor 3b (444 aa)
     
  0.965
EDP08357
Nuclear pre-mRNA splicing factor, component of splicing factor 3b (396 aa)
       
  0.964
EDP06172
Predicted protein (325 aa)
       
      0.953
EDP00603
Predicted protein (435 aa)
       
    0.915
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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