STRINGSTRING
EDP00117 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP00117" - Eukaryotic initiation factor in Chlamydomonas reinhardtii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP00117Eukaryotic initiation factor (197 aa)    
Predicted Functional Partners:
FER1
Pre-apoferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation (249 aa)
       
      0.789
EDP09711
Predicted protein (403 aa)
       
      0.424
EDP05971
Predicted protein (495 aa)
       
      0.424
DNJ30
DnaJ-like protein (3321 aa)
       
      0.424
EDP01537
Predicted protein (415 aa)
       
      0.424
EDO99668
Predicted protein (355 aa)
       
      0.424
EDO99343
Predicted protein (528 aa)
       
      0.424
NEP1
pre-rRNA processing protein (230 aa)
     
        0.402
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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